DAVID
RODRIGUEZ PENAS
Investigador en el periodo 2019-2021
Publicaciones (22) Publicaciones de DAVID RODRIGUEZ PENAS
2024
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Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells
PLoS computational biology, Vol. 20, Núm. 1, pp. e1011151
2023
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A new two-phase heuristic for a problem of food distribution with compartmentalized trucks and trailers
International Transactions in Operational Research, Vol. 30, Núm. 2, pp. 1031-1064
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Application of decomposition techniques in a wildfire suppression optimization model
Optimization and Engineering, Vol. 24, Núm. 4, pp. 2513-2548
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Computational advances in polynomial optimization: RAPOSa, a freely available global solver
Journal of Global Optimization, Vol. 85, Núm. 3, pp. 541-568
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Optimal evaluation of energy yield and driving force in microbial metabolic pathway variants
PLoS Computational Biology, Vol. 19, Núm. 7
2020
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A metaheuristic penalty approach for the starting point in nonlinear programming
RAIRO - Operations Research, Vol. 54, Núm. 2, pp. 451-469
2019
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Enhanced global optimization methods applied to complex fisheries stock assessment models
Applied Soft Computing Journal, Vol. 77, pp. 50-66
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Hybrid parallel multimethod hyperheuristic for mixed-integer dynamic optimization problems in computational systems biology
Journal of Supercomputing, Vol. 75, Núm. 7, pp. 3471-3498
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RAPOSa, una herramienta gratuita para resolver problemas de optimización polinómica
XIV Congreso Galego de Estatistica e Investigación de Operacions: libro de actas Vigo, 24-26 de outubro de 2019
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Un nuevo algoritmo heuristico para el truck and trailer routing problem
XIV Congreso Galego de Estatistica e Investigación de Operacions: libro de actas Vigo, 24-26 de outubro de 2019
2018
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Multimethod optimization for reverse engineering of complex biological networks
ACM International Conference Proceeding Series
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Multimethod optimization in the cloud: A case-study in systems biology modelling
Concurrency Computation , Vol. 30, Núm. 12
2017
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A cloud-based enhanced differential evolution algorithm for parameter estimation problems in computational systems biology
Cluster Computing, Vol. 20, Núm. 3, pp. 1937-1950
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A novel distributed multimethod to solve challenging global optimization problems in Computational Systems Biology
Actas XIII Congreso Galego de Estatística e Investigación de Operacións: Ferrol, do 26 ao 28 de outubro de 2017
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A parallel metaheuristic for large mixed-integer dynamic optimization problems, with applications in computational biology
PLoS ONE, Vol. 12, Núm. 8
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Evaluation of parallel differential evolution implementations on MapReduce and spark
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
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Parameter estimation in large-scale systems biology models: A parallel and self-adaptive cooperative strategy
BMC Bioinformatics, Vol. 18, Núm. 1
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Using the cloud for parameter estimation problems: comparing spark vs MPI with a case-study
Proceedings - 2017 17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGRID 2017
2015
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Enhanced parallel differential evolution algorithm for problems in computational systems biology
Applied Soft Computing Journal, Vol. 33, pp. 86-99
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Parallel metaheuristics in computational biology: An asynchronous Cooperative enhanced Scatter Search method
Procedia Computer Science