Publicacións (22) Publicacións de DAVID RODRIGUEZ PENAS

2024

  1. Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells

    PLoS computational biology, Vol. 20, Núm. 1, pp. e1011151

2023

  1. A new two-phase heuristic for a problem of food distribution with compartmentalized trucks and trailers

    International Transactions in Operational Research, Vol. 30, Núm. 2, pp. 1031-1064

  2. Application of decomposition techniques in a wildfire suppression optimization model

    Optimization and Engineering, Vol. 24, Núm. 4, pp. 2513-2548

  3. Computational advances in polynomial optimization: RAPOSa, a freely available global solver

    Journal of Global Optimization, Vol. 85, Núm. 3, pp. 541-568

  4. Optimal evaluation of energy yield and driving force in microbial metabolic pathway variants

    PLoS Computational Biology, Vol. 19, Núm. 7

2020

  1. A metaheuristic penalty approach for the starting point in nonlinear programming

    RAIRO - Operations Research, Vol. 54, Núm. 2, pp. 451-469

2019

  1. Enhanced global optimization methods applied to complex fisheries stock assessment models

    Applied Soft Computing Journal, Vol. 77, pp. 50-66

  2. Hybrid parallel multimethod hyperheuristic for mixed-integer dynamic optimization problems in computational systems biology

    Journal of Supercomputing, Vol. 75, Núm. 7, pp. 3471-3498

  3. RAPOSa, una herramienta gratuita para resolver problemas de optimización polinómica

    XIV Congreso Galego de Estatistica e Investigación de Operacions: libro de actas Vigo, 24-26 de outubro de 2019

  4. Un nuevo algoritmo heuristico para el truck and trailer routing problem

    XIV Congreso Galego de Estatistica e Investigación de Operacions: libro de actas Vigo, 24-26 de outubro de 2019

2018

  1. Multimethod optimization for reverse engineering of complex biological networks

    ACM International Conference Proceeding Series

  2. Multimethod optimization in the cloud: A case-study in systems biology modelling

    Concurrency Computation , Vol. 30, Núm. 12

2017

  1. A cloud-based enhanced differential evolution algorithm for parameter estimation problems in computational systems biology

    Cluster Computing, Vol. 20, Núm. 3, pp. 1937-1950

  2. A novel distributed multimethod to solve challenging global optimization problems in Computational Systems Biology

    Actas XIII Congreso Galego de Estatística e Investigación de Operacións: Ferrol, do 26 ao 28 de outubro de 2017

  3. A parallel metaheuristic for large mixed-integer dynamic optimization problems, with applications in computational biology

    PLoS ONE, Vol. 12, Núm. 8

  4. Evaluation of parallel differential evolution implementations on MapReduce and spark

    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

  5. Parameter estimation in large-scale systems biology models: A parallel and self-adaptive cooperative strategy

    BMC Bioinformatics, Vol. 18, Núm. 1

  6. Using the cloud for parameter estimation problems: comparing spark vs MPI with a case-study

    Proceedings - 2017 17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGRID 2017

2015

  1. Enhanced parallel differential evolution algorithm for problems in computational systems biology

    Applied Soft Computing Journal, Vol. 33, pp. 86-99

  2. Parallel metaheuristics in computational biology: An asynchronous Cooperative enhanced Scatter Search method

    Procedia Computer Science