David Ryan
Glowacki
Investigador Oportunius
University of Bristol
Brístol, Reino UnidoPublicacións en colaboración con investigadores/as de University of Bristol (74)
2023
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Free energy along drug-protein binding pathways interactively sampled in virtual reality
Scientific Reports, Vol. 13, Núm. 1
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Interactive molecular dynamics in virtual reality for modelling materials and catalysts
Journal of Molecular Graphics and Modelling, Vol. 125
2022
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Calculating Photoabsorption Cross-Sections for Atmospheric Volatile Organic Compounds
ACS Earth and Space Chemistry, Vol. 6, Núm. 1, pp. 207-217
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Group VR experiences can produce ego attenuation and connectedness comparable to psychedelics
Scientific Reports, Vol. 12, Núm. 1
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The emerging potential of interactive virtual reality in drug discovery
Expert Opinion on Drug Discovery, Vol. 17, Núm. 7, pp. 685-698
2021
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A community-powered search of machine learning strategy space to find NMR property prediction models
PLoS ONE, Vol. 16, Núm. 7 July
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AutoMeKin2021: An open-source program for automated reaction discovery
Journal of Computational Chemistry, Vol. 42, Núm. 28, pp. 2036-2048
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ChemDyME: Kinetically Steered, Automated Mechanism Generation through Combined Molecular Dynamics and Master Equation Calculations
Journal of Chemical Theory and Computation, Vol. 17, Núm. 8, pp. 4901-4912
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Discovery of SARS-CoV-2 Mpropeptide inhibitors from modelling substrate and ligand binding
Chemical Science, Vol. 12, Núm. 41, pp. 13686-13703
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Exploring human-guided strategies for reaction network exploration: Interactive molecular dynamics in virtual reality as a tool for citizen scientists
Journal of Chemical Physics, Vol. 155, Núm. 15
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Nonadiabatic Kinetics in the Intermediate Coupling Regime: Comparing Molecular Dynamics to an Energy-Grained Master Equation
Journal of Physical Chemistry A, Vol. 125, Núm. 16, pp. 3473-3488
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Visual Continuity of Protein Secondary Structure Rendering: Application to SARS-CoV-2 Mpro in Virtual Reality
Frontiers in Computer Science, Vol. 3
2020
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Combining Virtual Reality Visualization with Ensemble Molecular Dynamics to Study Complex Protein Conformational Changes
Journal of Chemical Information and Modeling, Vol. 60, Núm. 12, pp. 6344-6354
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IMPRESSION-prediction of NMR parameters for 3-dimensional chemical structures using machine learning with near quantum chemical accuracy
Chemical Science, Vol. 11, Núm. 2, pp. 508-515
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Interactive Molecular Dynamics in Virtual Reality Is an Effective Tool for Flexible Substrate and Inhibitor Docking to the SARS-CoV-2 Main Protease
Journal of Chemical Information and Modeling, Vol. 60, Núm. 12, pp. 5803-5814
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Interactive molecular dynamics in virtual reality for accurate flexible protein-ligand docking
PLoS ONE, Vol. 15, Núm. 3
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Isness: Using Multi-Person VR to Design Peak Mystical Type Experiences Comparable to Psychedelics
Conference on Human Factors in Computing Systems - Proceedings
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Narupa iMD: A VR-Enabled Multiplayer Framework for Streaming Interactive Molecular Simulations
ACM SIGGRAPH 2020 Immersive Pavilion, SIGGRAPH 2020
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Subtle sensing: Detecting differences in the flexibility of virtually simulated molecular objects
Conference on Human Factors in Computing Systems - Proceedings
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Towards molecular musical instruments: Interactive sonifications of 17-Alanine, graphene and carbon nanotubes
ACM International Conference Proceeding Series