By-products as an amendment of a mine soileffects on microbial biomass determined using phospholipid fatty acids

  1. Santás-Miguel, Vanesa
  2. Cutillas-Barreiro, Laura
  3. Nóvoa-Muñoz, Juan Carlos
  4. Arias-Estévez, Manuel
  5. Díaz-Raviña, Montserrat
  6. Fernández-Sanjurjo, María José
  7. Álvarez-Rodríguez, Esperanza
  8. Núñez-Delgado, Avelino
  9. Fernández-Calviño, David
Journal:
Spanish Journal of Soil Science: SJSS

ISSN: 2253-6574

Year of publication: 2018

Volume: 8

Issue: 1

Pages: 1-11

Type: Article

DOI: 10.3232/SJSS.2018.V8.N1.01 DIALNET GOOGLE SCHOLAR lock_openDialnet editor

More publications in: Spanish Journal of Soil Science: SJSS

Abstract

In the present work, the effect of two by-products (pine bark and crushed mussel shell) on microbial biomass and community structure was studied in a soil from a mine tailing located in a copper mine. In a laboratory experiment, different doses (0, 12, 24, 48, 96 and 192 Mg ha-1) of pine bark, crushed mussel shell or mixtures of both by-products were added to the soil. The amended soil samples were incubated for one year at 60% of water holding capacity, and then 33 phospholipid fatty acids (PLFAs) were extracted from these samples and quantified. The PLFAs concentrations were used for different microbial biomass estimations: total biomass, bacterial biomass, fungal biomass, gram-positive (G+) biomass and gram-negative (G-) biomass. The addition of crushed mussel had no significant effects on the total soil microbial biomass, either bacterial of fungal biomass. However, the addition of pine bark increased the total microbial biomass in the soil (up to 40%), mainly due to increases in the fungal biomass (it increased 1600%). No synergistic effects were observed when the soil was amended with both, pine bark and crushed mussel shell. The main community structure changes were due to the addition of pine bark to the soil, and were also due to modifications in fungal communities. Our results suggest that the microbial biomass was mainly limited in the mine soil by low organic matter concentrations, and therefore, practices increasing the amount of soil organic matter should be priorities for soil reclamation.

Bibliographic References

  • Abad-Valle P, Iglesias-Jiménez E, Álvarez-Ayuso E. 2017. A comparative study on the influence of different organic amendments on trace element mobility and microbial functionality of a polluted mine soil. J Environ Manage. 188: 287-296.
  • Aciego-Pietri JC, Brookes PC. 2009. Substrate inputs and pH as factors controlling microbial biomass, activity and community structure in an arable soil. Soil Biol Biochem. 41:1396-1405.
  • Álvarez E, Fernández-Marcos ML, Vaamonde C, Fernández-Sanjurjo MJ. 2003. Heavy metals in the dump of an abandoned mine in Galicia (NW Spain) and in the spontaneously occurring vegetation. Sci Total Environ. 313:185-197.
  • Arias-Estévez M, López-Periago E, Nóvoa-Muñoz JC, Torrado-Agrasar A, Simal Gándara J. 2007. Treatment of an acid soil with bentonite used for wine fining: effects on soil properties and the growth of Lolium multiflorum. J Agric Food Chem. 55:7541-7546.
  • Barreiro A, Martín A, Carballas T, Díaz-Raviña M. 2010. Response of soil microbial communities to fire and fire-fighting chemicals. Sci Total Environ. 408:6172-6178.
  • Calvo de Anta R, Luís Calvo E, Casás Sabarís F, Galiñanes Costa JM, Matilla Mosquera N, Macías Vázquez F, Camps Arbestain M, Vázquez García N. 2015. Soil organic carbon in northern Spain (Galicia, Asturias, Cantabria and País Vasco). Span J Soil Sci. 5:41-53.
  • Cutillas-Barreiro L, Ansias-Manso L, Fernández-Calviño D, Arias-Estévez M, Nóvoa-Muñoz JC, Fernández-Sanjurjo MJ, Álvarez-Rodríguez E, Núñez-Delgado A. 2014. Pine bark as bio-adsorbent for Cd, Cu, Ni, Pb and Zn: batchtype and stirred flow chamber experiments. J Environ Manag. 144:258-264.
  • Dangi SR, Stahl PD, Wick AF, Ingram LJ, Buyer JS. 2012. Soil microbial community recovery in reclaimed soils on a surface coal mine site. Soil Sci Soc Am J. 76:915-924.
  • Farouq R, Yousef NS. 2015. Equilibrium and kinetics studies of adsorption of copper (II) ions on natural biosorbent. International J Chem Eng Appl. 6:319-324.
  • Fernández-Calviño D, Cutillas-Barreiro L, Nóvoa-Muñoz JC, Díaz-Raviña M, Fernández-Sanjurjo MJ, Álvarez-Rodriguez E, Núñez-Delgado A, Arias-Estévez M, Rousk, J. Using pine bark/mussel shell amendments to reclaim microbial functions in a Cu polluted mine soil. (Submitted).
  • Fernández-Calviño D, Cutillas-Barreiro L, Paradelo-Núñez R, Nóvoa-Muñoz JC, Fernández-Sanjurjo MJ, Álvarez-Rodriguez E, Núñez-Delgado A, Arias-Estévez M. 2017. Heavy metals fractionation and desorption in a pine bark amended mine soil. J Environ Manage. 192:79-88.
  • Fernández-Calviño D, Garrido-Rodríguez B, Arias-Estévez M, Díaz-Raviña M, Álvarez-Rodríguez E, Fernández-Sanjurjo MJ, Nuñez-Delgado A. 2015. Effect of crushed mussel shell addition on bacterial growth in acid polluted soils. Appl Soil Ecol. 85:65-68.
  • Fernández-Calviño D, Martín A, Arias-Estévez M, Bååth E, Díaz-Raviña M. 2010. Microbial community structure of vineyard soils with different pH and copper content. Appl Soil Ecol. 46:276-282.
  • Fernández-Calviño D, Pérez-Armada L, Cutillas-Barreiro L, Paradelo-Núñez R, Núñez-Delgado A, Fernández-Sanjurjo MJ, Álvarez-Rodriguez E, Arias-Estévez M. 2016. Changes in Cd, Cu, Ni, Pb and Zn fractionation and liberation due to mussel shell amendment on a mine soil. Land Degrad Develop. 27:1276-1285.
  • Fernández-Pazos MT, Garrido-Rodriguez B, Nóvoa-Muñoz JC, Arias-Estévez M, Fernández-Sanjurjo MJ, Núñez-Delgado A, Álvarez E. 2013. Cr(VI) adsorption and desorption on soils and bio-sorbents. Water Air Soil Pollut. 224:1366.
  • IUSS Working Group WRB. 2015. World Reference Base for Soil Resources 2014, update 2015. International soil classification system for naming soils and creating legends for soil maps. World Soil Resources Reports No. 106. Rome: FAO.
  • Frostegård Å, Bååth E. 1996. The use of phospholipids fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol Fertil Soils 22:59-65.
  • Frostegård Å, Bååth E, Tunlid A. 1993. Shifts in the structure of soil microbial communities in limed soils as revealed by phospholipid fatty acid analysis. Soil Biol Biochem. 25:723-730.
  • Garrido-Rodríguez B, Fernández-Calviño D, Nóvoa Muñoz JC, Arias-Estévez M, Díaz-Raviña M, Álvarez-Rodríguez E, Fernández-Sanjurjo MJ, Núñez-Delgado A. 2013. pH-dependent copper release in acid soils treated with crushed mussel shell. Int J Environ Sci Technol. 10:983-994.
  • Giller KE, Witter E, Mcgrath SP. 1998. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem. 30:1389-1414.
  • Khan M, Scullion J. 2002. Effects of metal (Cd, Cu, Ni, Pb or Zn) enrichment of sewage-sludge on soil micro-organisms and their activities. Appl Soil Ecol. 20:145-155.
  • Masto RE, Sheik S, Nehru G, Selvi VA, George J, Ram LC. 2015. Assessment of environmental soil quality around Sonepur Bazari mine of Raniganj coalfield, India. Solid Earth 6: 811-821.
  • Meisner A, Bååth E, Rousk J. 2013. Microbial growth responses upon rewetting soil dried for four days or one year. Soil Biol Biochem. 66:188-192.
  • Nannipieri P, Ascher J, Ceccherini MT, Landi L, Pietramellara G, Renella G. 2003. Microbial diversity and soil functions. Eur J Soil Sci. 54:655-670.
  • Nguyen TAH, Ngo HH, Guo WS, Zhang J, Liang S, Yue QI, Li Q, Nguyen TV. 2013. Applicability of agricultural waste and by-products for adsorptive removal of heavy metals from wastewater. Bioresour Technol. 148:574-585.
  • Nunes I, Jacquiod S, Brejnrod A, Holm PE, Johansen A, Brandt KK, Priemé A, Sørensen SJ. 2016. Coping with copper: legacy effect of copper on potential activity of soil bacteria following a century of exposure. FEMS Microbiol Ecol. 92:fiw175.
  • Paradelo R, Barral MT. 2017. Availability and fractionation of Cu, Pb and Zn in an acid soil from Galicia (NW Spain) amended with municipal solid waste compost. Span J Soil Sci. 7:31-39.
  • Perlatti F, Osório-Ferreira T, Espíndola-Romero R, Gomes-Costa MC, Otero XL. 2015. Copper accumulation and changes in soil physical-chemical properties promoted by native plants in an abandoned mine site in northeastern Brazil: implications for restoration of mine sites. Ecol Eng. 82:103-111.
  • Rodríguez-Salgado I, Pérez-Rodríguez P, Gómez-Armesto A, Nóvoa-Muñoz JC, Arias-Estévez M, Fernández-Calviño D. 2016. Cu retention in an acid soil amended with perlite winery waste. Environ Sci Pollut Res. 23:3789-3798.
  • Rousk J, Aldén-Demoling L, Bahr A, Bååth E. 2008. Examining the fungal and bacterial niche overlap using selective inhibitors in soil. FEMS Microbiol Ecol. 63:350-358.
  • Rousk J, Brookes PC, Bååth E. 2009. Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization. Appl Environ Microbiol. 75:1589-1596.
  • Rousk J, Brookes PC, Bååth E. 2010. The microbial PLFA composition as affected by pH in an arable soil. Soil Biol Biochem. 42:516-520.
  • Tian J, Wang J, Dippold M, Gao Y, Blagodatskaya E, Kuzyakov Y. 2016. Biochar affects soil organic matter cycling and microbial functions but does not alter microbial community structure in a paddy soil. Sci Total Environ. 556:89-97.
  • Zelles L. 1999. Fatty acid patterns of phospholipids and lipopolysaccharides in the characterization of microbial communities in soil: a review. Biol Fertil Soils 29:111-129.
  • Zornoza R, Acosta JA, Martínez-Martínez S, Faz A, Bååth E. 2015. Main factors controlling microbial community structure and function after reclamation of a tailing pond with aided phytostabilization. Geoderma 245-246:1-10.
  • Zornoza R, Acosta JA, Faz A, Bååth E. 2016. Microbial growth and community structure in acid mine soils after addition of different amendments for soil reclamation. Geoderma 272:64-72.